BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030F04LP1|AL429248
(995 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1037 1906 0.0
>3x_Contig1037
Length = 3353
Score = 1906 bits (959), Expect = 0.0
Identities = 984/993 (99%)
Strand = Plus / Plus
Query: 1 gatcctagaaaaggccaggattttaaaaagagattagaagtttcaaagccttttccttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1793 gatcctagaaaaggccaggattttaaaaagagattagaagtttcaaagccttttccttag 1852
Query: 61 cagcatgtttgaatatgttataattgtttgccatgtccttaaagttacaatgatggctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1853 cagcatgtttgaatatgttataattgtttgccatgtccttaaagttacaatgatggctga 1912
Query: 121 caagtttgtcagattgcaacttaccagaacaacaattcttcattagcattgatgtggtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1913 caagtttgtcagattgcaacttaccagaacaacaattcttcattagcattgatgtggtat 1972
Query: 181 tggtgttaacaagaccgctggtaatagtcaaatttttaatccataacttgtcaattgcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1973 tggtgttaacaagaccgctggtaatagtcaaatttttaatccataacttgtcaattgcaa 2032
Query: 241 agtcaacaggtttcccatgcacacccacgtttgccaagtgacccccttccttaataattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2033 agtcaacaggtttcccatgcacacccacgtttgccaagtgacccccttccttaataattt 2092
Query: 301 gttggcagatgtcccaagttggttgagcacccacagcttccatagcacagtcaacaccac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2093 gttggcagatgtcccaagttggttgagcacccacagcttccatagcacagtcaacaccac 2152
Query: 361 gtccatttgtgatttccaagatcttagcgacagcctcctcttttcctgagttgatggtat 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2153 gtccatttgtgatttccaagatcttagcgacagcatcctcttttcctgagttgatggtat 2212
Query: 421 gtgtagctcccatttcctttgccatttccaaacggttgtcgtccatgtcaacgacaatta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2213 gtgtagctcccatttcctttgccatttccaaacggttgtcgtccatgtcaacgacaatta 2272
Query: 481 acaggcttggagagtacaattgagaagtcaacacacatcccataccaactggaccggccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2273 acaggcttggagagtacaattgagaagtcaacacacatcccataccaactggaccggccc 2332
Query: 541 ctaaaattgccacagagtcaccgggtttgacatttcccatttgaacaccgatttcatggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2333 ctaaaattgccacagagtcaccgggtttgacatttcccatttgaacaccgatttcatggg 2392
Query: 601 cagtaggcaaggcatcggaaagcaagacagccttttcatcagataatccttctggaagag 660
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2393 cagtaggcaaggcatcggaaagcaagacagcattttcatcagataatccttctggaagag 2452
Query: 661 catacaaagaggtatcagccaatggagtkcgaacatattcagcctgtgtaccatcaatcg 720
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 2453 catacaaagaggtatcagcaaatggagtccgaacatattcagcctgtgtaccatcaatcg 2512
Query: 721 agtkacccaaagcccaaccaccatcattcatacagtgtgcgttcatacctctggcacagt 780
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2513 agtaacccaaagcccaaccaccatcattcatacagtgtgcgtacatacctctggcacagt 2572
Query: 781 tttcgcaagttccacatctagtaatgcaagaaataattactttatcacctttcttgatgt 840
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2573 tttcgcaagtaccacatctagtaatgcaagaaataattactttatcacctttcttgatgt 2632
Query: 841 tacgcaccgcatcaccaacttcagtgacaataccagtcccttcatgacctaggacacgtc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2633 tacgcaccgcatcaccaacttcagtgacaataccagtcccttcatgacctaggacacgtc 2692
Query: 901 cattgaatgaaccttcatttttgacggsaatctcttcgatttcaggactcttacctttcc 960
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2693 cattgaatgaaccttcatttttgacggcaatctcttcgatttcaggactcttacctttcc 2752
Query: 961 agataccaacgtctgttccacaaatcgatgtgt 993
|||||||||||||||| ||||||||||||||||
Sbjct: 2753 agataccaacgtctgtaccacaaatcgatgtgt 2785
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6483
Number of Sequences: 1807
Number of extensions: 6483
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 995
length of database: 10,358,551
effective HSP length: 16
effective length of query: 979
effective length of database: 10,329,639
effective search space: 10112716581
effective search space used: 10112716581
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)